1. Home
  2. Species
  3. Glycine max
  4. Sequence
  5. Glyma.19G127700

Glyma.19G127700


Description : beta-6 tubulin


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G127700
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
A4A49_21669 No alias tubulin beta-2 chain 0.02 Orthogroups_2024-Update
Cre12.g542250 No alias tubulin beta chain 2 0.01 Orthogroups_2024-Update
Cre12.g549550 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Kfl00215_0220 kfl00215_0220_v1.1 (p04690|tbb_chlre : 826.0) Tubulin beta-1/beta-2 chain -... 0.02 Orthogroups_2024-Update
MA_251404g0010 No alias (q40665|tbb3_orysa : 841.0) Tubulin beta-3 chain (Beta-3... 0.02 Orthogroups_2024-Update
Solyc06g005910 No alias Tubulin beta chain (AHRD V3.3 *** M1BVE7_SOLTU) 0.03 Orthogroups_2024-Update
Sopen04g035100 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 265 386
IPR003008 Tubulin_FtsZ_GTPase 7 215
No external refs found!