Description : homeobox from Arabidopsis thaliana
Gene families : OG_42_0000184 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000184_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.19G149000 | |
Cluster | HCCA clusters: Cluster_183 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g44910 | No alias | Uncharacterized protein At2g44910 (Fragment)... | 0.03 | Orthogroups_2024-Update | |
GRMZM2G047715 | No alias | homeobox from Arabidopsis thaliana | 0.04 | Orthogroups_2024-Update | |
Glyma.02G171300 | No alias | homeobox from Arabidopsis thaliana | 0.04 | Orthogroups_2024-Update | |
Glyma.09G109700 | No alias | homeobox from Arabidopsis thaliana | 0.03 | Orthogroups_2024-Update | |
PSME_00039454-RA | No alias | (at4g16780 : 83.2) Encodes a homeodomain-leucine zipper... | 0.03 | Orthogroups_2024-Update | |
Sopen04g030810 | No alias | Homeobox domain | 0.03 | Orthogroups_2024-Update | |
Sopen05g003890 | No alias | Homeobox domain | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
CC | GO:0031090 | organelle membrane | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
No external refs found! |