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  5. Glyma.19G169200

Glyma.19G169200


Description : pleiotropic drug resistance 12


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G169200
Cluster HCCA clusters: Cluster_334

Target Alias Description ECC score Gene Family Method Actions
115821 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 Orthogroups_2024-Update
412710 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
415867 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
441717 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
441720 No alias pleiotropic drug resistance 7 0.03 Orthogroups_2024-Update
A4A49_09052 No alias pleiotropic drug resistance protein 1 0.03 Orthogroups_2024-Update
A4A49_10347 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
A4A49_13046 No alias pleiotropic drug resistance protein 1 0.02 Orthogroups_2024-Update
Bradi2g43120 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
Brara.F01034.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.F01068.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Brara.K01577.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Cre01.g007000 No alias pleiotropic drug resistance 3 0.01 Orthogroups_2024-Update
Cre09.g395750 No alias pleiotropic drug resistance 4 0.02 Orthogroups_2024-Update
GRMZM2G003411 No alias pleiotropic drug resistance 12 0.04 Orthogroups_2024-Update
GRMZM2G118243 No alias pleiotropic drug resistance 4 0.03 Orthogroups_2024-Update
GRMZM2G143139 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Glyma.05G011900 No alias pleiotropic drug resistance 4 0.04 Orthogroups_2024-Update
Glyma.14G193300 No alias pleiotropic drug resistance 3 0.03 Orthogroups_2024-Update
Glyma.20G187400 No alias pleiotropic drug resistance 11 0.03 Orthogroups_2024-Update
HORVU3Hr1G053380.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Kfl00018_0500 kfl00018_0500_v1.1 (q8gu90|pdr3_orysa : 1455.0) Pleiotropic drug resistance... 0.02 Orthogroups_2024-Update
LOC_Os01g08260 No alias pleiotropic drug resistance protein 4, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g16458 No alias pleiotropic drug resistance protein 4, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g37700 No alias pleiotropic drug resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426781g0010 No alias (at2g36380 : 1292.0) pleiotropic drug resistance 6... 0.03 Orthogroups_2024-Update
MA_10427683g0010 No alias (at1g59870 : 1105.0) ATP binding cassette transporter.... 0.03 Orthogroups_2024-Update
MA_12965g0010 No alias (q949g3|pdr1_nicpl : 544.0) Pleiotropic drug resistance... 0.04 Orthogroups_2024-Update
MA_3894g0010 No alias (q76cu2|pdr1_tobac : 501.0) Pleiotropic drug resistance... 0.03 Orthogroups_2024-Update
PSME_00005403-RA No alias (q8gu88|pdr7_orysa : 1833.0) Putative pleiotropic drug... 0.03 Orthogroups_2024-Update
PSME_00013643-RA No alias (q76cu2|pdr1_tobac : 1408.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
Potri.003G179000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Seita.2G179600.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.4G181500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Seita.9G187800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G087800.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Solyc06g065670 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 847 1001
IPR029481 ABC_trans_N 86 137
IPR013581 PDR_assoc 715 778
IPR003439 ABC_transporter-like 162 344
IPR013525 ABC_2_trans 498 710
IPR013525 ABC_2_trans 1146 1360
No external refs found!