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  5. Glyma.19G169400

Glyma.19G169400


Description : pleiotropic drug resistance 12


Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G169400
Cluster HCCA clusters: Cluster_520

Target Alias Description ECC score Gene Family Method Actions
At4g15230 No alias ABC transporter G family member 30... 0.03 Orthogroups_2024-Update
Bradi1g26040 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
Bradi2g10110 No alias pleiotropic drug resistance 12 0.02 Orthogroups_2024-Update
Brara.F01033.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.H02545.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Glyma.15G012000 No alias pleiotropic drug resistance 12 0.03 Orthogroups_2024-Update
Glyma.18G063400 No alias pleiotropic drug resistance 3 0.02 Orthogroups_2024-Update
MA_10427683g0010 No alias (at1g59870 : 1105.0) ATP binding cassette transporter.... 0.02 Orthogroups_2024-Update
MA_10430834g0010 No alias (at1g59870 : 357.0) ATP binding cassette transporter.... 0.04 Orthogroups_2024-Update
PSME_00007073-RA No alias (q8gu88|pdr7_orysa : 1875.0) Putative pleiotropic drug... 0.04 Orthogroups_2024-Update
PSME_00012870-RA No alias (q76cu2|pdr1_tobac : 1718.0) Pleiotropic drug resistance... 0.05 Orthogroups_2024-Update
PSME_00013320-RA No alias (q8gu88|pdr7_orysa : 1886.0) Putative pleiotropic drug... 0.02 Orthogroups_2024-Update
Potri.001G189500 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.02 Orthogroups_2024-Update
Potri.001G251100 No alias pleiotropic drug resistance 3 0.04 Orthogroups_2024-Update
Potri.003G049600 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Orthogroups_2024-Update
Potri.010G235800 No alias pleiotropic drug resistance 6 0.02 Orthogroups_2024-Update
Seita.5G221500.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.002G174000.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.002G321300.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.003G215600.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Sobic.003G215800.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Sobic.004G087700.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
Solyc05g053600 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g053610 No alias Pleiotropic drug resistance ABC transporter (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen12g034810 No alias ABC-2 type transporter 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013581 PDR_assoc 727 789
IPR003439 ABC_transporter-like 174 356
IPR013525 ABC_2_trans 510 722
IPR013525 ABC_2_trans 1155 1369
IPR029481 ABC_trans_N 98 148
IPR003439 ABC_transporter-like 858 1010
No external refs found!