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  5. Glyma.19G174700

Glyma.19G174700


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0001923 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001923_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G174700
Cluster HCCA clusters: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
A4A49_23425 No alias protein slow green 1, chloroplastic 0.02 Orthogroups_2024-Update
At3g18420 No alias protein SLOW GREEN 1, chloroplastic... 0.04 Orthogroups_2024-Update
MA_10426317g0010 No alias (at4g39470 : 91.7) Tetratricopeptide repeat (TPR)-like... 0.03 Orthogroups_2024-Update
Potri.012G032800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G080000 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Solyc01g008160 No alias Tetratricopeptide repeat-containing family protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc10g085900 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
InterPro domains Description Start Stop
IPR019734 TPR_repeat 258 286
No external refs found!