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  5. Glyma.19G182100

Glyma.19G182100


Description : lysine decarboxylase family protein


Gene families : OG_42_0000308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000308_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G182100
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
A4A49_28491 No alias cytokinin riboside 5'-monophosphate phosphoribohydrolase log3 0.03 Orthogroups_2024-Update
At5g06300 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.05 Orthogroups_2024-Update
Brara.B00088.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.04 Orthogroups_2024-Update
Brara.B00205.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.03 Orthogroups_2024-Update
GRMZM2G073634 No alias Putative lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Glyma.03G181300 No alias lysine decarboxylase family protein 0.03 Orthogroups_2024-Update
Glyma.17G257200 No alias Putative lysine decarboxylase family protein 0.04 Orthogroups_2024-Update
Glyma.19G198400 No alias Putative lysine decarboxylase family protein 0.06 Orthogroups_2024-Update
HORVU2Hr1G089620.5 No alias cytokinin phosphoribohydrolase *(LOG) 0.04 Orthogroups_2024-Update
LOC_Os01g40630 No alias uncharacterized protein PA4923, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g51210 No alias uncharacterized protein PA4923, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g49050 No alias possible lysine decarboxylase domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os10g33900 No alias possible lysine decarboxylase domain containing protein,... 0.02 Orthogroups_2024-Update
Potri.002G012500 No alias Putative lysine decarboxylase family protein 0.05 Orthogroups_2024-Update
Potri.009G010800 No alias Putative lysine decarboxylase family protein 0.02 Orthogroups_2024-Update
Pp1s117_65V6 No alias T2N18.3; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.5G290000.1 No alias cytokinin phosphoribohydrolase *(LOG) 0.03 Orthogroups_2024-Update
Solyc01g005680 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
Solyc06g075090 No alias Cytokinin riboside 5'-monophosphate phosphoribohydrolase... 0.03 Orthogroups_2024-Update
Sopen06g031510 No alias Possible lysine decarboxylase 0.03 Orthogroups_2024-Update
Sopen08g018350 No alias Possible lysine decarboxylase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004451 isocitrate lyase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006090 pyruvate metabolic process IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006096 glycolytic process IEP Predicted GO
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Predicted GO
BP GO:0006757 ATP generation from ADP IEP Predicted GO
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009166 nucleotide catabolic process IEP Predicted GO
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016833 oxo-acid-lyase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predicted GO
BP GO:0019362 pyridine nucleotide metabolic process IEP Predicted GO
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Predicted GO
BP GO:0042866 pyruvate biosynthetic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046031 ADP metabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predicted GO
BP GO:0046939 nucleotide phosphorylation IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072524 pyridine-containing compound metabolic process IEP Predicted GO
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1901292 nucleoside phosphate catabolic process IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR031100 LOG_fam 57 187
No external refs found!