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  5. Glyma.19G213200

Glyma.19G213200


Description : Ribosomal protein L19e family protein


Gene families : OG_42_0001643 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G213200
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
271656 No alias Ribosomal protein L19e family protein 0.09 Orthogroups_2024-Update
Bradi1g17920 No alias Ribosomal protein L19e family protein 0.12 Orthogroups_2024-Update
Bradi1g63010 No alias Ribosomal protein L19e family protein 0.07 Orthogroups_2024-Update
Brara.I00133.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.I05560.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.J00128.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Cre02.g075700 No alias Ribosomal protein L19e family protein 0.08 Orthogroups_2024-Update
GRMZM2G116135 No alias Ribosomal protein L19e family protein 0.07 Orthogroups_2024-Update
Glyma.03G216600 No alias Ribosomal protein L19e family protein 0.03 Orthogroups_2024-Update
Glyma.10G016400 No alias Ribosomal protein L19e family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G049670.2 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
MA_22977g0010 No alias (at1g02780 : 282.0) embryo defective 2386 (emb2386);... 0.05 Orthogroups_2024-Update
Mp7g09050.1 No alias component RPL19 of LSU proteome component 0.06 Orthogroups_2024-Update
PSME_00044681-RA No alias (at3g16780 : 285.0) Ribosomal protein L19e family... 0.03 Orthogroups_2024-Update
Potri.012G037500 No alias Ribosomal protein L19e family protein 0.03 Orthogroups_2024-Update
Pp1s121_144V6 No alias 60s ribosomal protein 0.13 Orthogroups_2024-Update
Pp1s144_37V6 No alias ribosomal protein l19 0.13 Orthogroups_2024-Update
Pp1s235_118V6 No alias 60s ribosomal protein 0.07 Orthogroups_2024-Update
Pp1s302_25V6 No alias ribosomal protein l19 0.04 Orthogroups_2024-Update
Pp1s3_375V6 No alias 60s ribosomal protein l19-3 0.12 Orthogroups_2024-Update
Pp1s50_102V6 No alias 60s ribosomal protein l19-3 0.12 Orthogroups_2024-Update
Seita.4G043900.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Sobic.004G045300.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.010G069400.1 No alias component *(eL19) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Solyc06g009210 No alias Ribosomal protein L19 (AHRD V3.3 *** K4C3V1_SOLLC) 0.09 Orthogroups_2024-Update
Sopen06g003980 No alias Ribosomal protein L19e 0.03 Orthogroups_2024-Update
Sopen09g030210 No alias Ribosomal protein L19e 0.04 Orthogroups_2024-Update
evm.model.contig_735.3 No alias (at3g16780 : 205.0) Ribosomal protein L19e family... 0.06 Orthogroups_2024-Update
evm.model.tig00021181.1 No alias (at1g02780 : 206.0) embryo defective 2386 (emb2386);... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000196 Ribosomal_L19/L19e 4 146
No external refs found!