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  5. Glyma.19G232100

Glyma.19G232100


Description : ribosomal protein L18


Gene families : OG_42_0002023 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G232100
Cluster HCCA clusters: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
267976 No alias ribosomal protein L18 0.04 Orthogroups_2024-Update
A4A49_59911 No alias 60s ribosomal protein l18-2 0.04 Orthogroups_2024-Update
A4A49_64192 No alias 60s ribosomal protein l18-2 0.05 Orthogroups_2024-Update
At3g05590 No alias RPL18 [Source:UniProtKB/TrEMBL;Acc:A0A178V8M9] 0.07 Orthogroups_2024-Update
At5g27850 No alias 60S ribosomal protein L18-3... 0.07 Orthogroups_2024-Update
Bradi1g17970 No alias Ribosomal protein L18e/L15 superfamily protein 0.06 Orthogroups_2024-Update
Bradi1g62930 No alias ribosomal protein L18 0.02 Orthogroups_2024-Update
Bradi2g35090 No alias Ribosomal protein L18e/L15 superfamily protein 0.08 Orthogroups_2024-Update
Brara.A03704.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.B03559.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.C03111.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.F02840.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Brara.I00454.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Cre12.g512600 No alias ribosomal protein L18 0.07 Orthogroups_2024-Update
GRMZM2G104025 No alias Ribosomal protein L18e/L15 superfamily protein 0.04 Orthogroups_2024-Update
Glyma.03G215300 No alias Ribosomal protein L18e/L15 superfamily protein 0.05 Orthogroups_2024-Update
Glyma.19G211800 No alias Ribosomal protein L18e/L15 superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G237400 No alias ribosomal protein L18 0.05 Orthogroups_2024-Update
HORVU2Hr1G018820.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Mp1g22500.1 No alias component RPL18 of LSU proteome component 0.02 Orthogroups_2024-Update
PSME_00010533-RA No alias (at5g27850 : 302.0) Ribosomal protein L18e/L15... 0.04 Orthogroups_2024-Update
Potri.014G127300 No alias ribosomal protein L18 0.05 Orthogroups_2024-Update
Pp1s2_233V6 No alias 60s ribosomal protein l18 0.04 Orthogroups_2024-Update
Pp1s304_9V6 No alias 60s ribosomal protein l18 0.06 Orthogroups_2024-Update
Pp1s45_11V6 No alias 60s ribosomal protein l18 0.05 Orthogroups_2024-Update
Pp1s536_8V6 No alias 60s ribosomal protein l18 0.06 Orthogroups_2024-Update
Seita.7G267500.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Seita.9G410200.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.001G377800.2 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.002G415500.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Sobic.009G050300.1 No alias component *(eL18) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Solyc01g099900 No alias 60S ribosomal protein L18, putative (AHRD V3.3 *** B9RFD6_RICCO) 0.07 Orthogroups_2024-Update
Solyc09g075290 No alias 60S ribosomal protein L18, putative (AHRD V3.3 *** B9SAT7_RICCO) 0.06 Orthogroups_2024-Update
Sopen01g043420 No alias Ribosomal protein L18e/L15 0.08 Orthogroups_2024-Update
Sopen09g030080 No alias Ribosomal protein L18e/L15 0.04 Orthogroups_2024-Update
evm.model.contig_3399.2 No alias (at3g05590 : 193.0) Encodes cytoplasmic ribosomal... 0.09 Orthogroups_2024-Update
evm.model.tig00000142.18 No alias (o65729|rl18_cicar : 134.0) 60S ribosomal protein L18... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 41 226
No external refs found!