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  5. Glyma.19G232700

Glyma.19G232700


Description : Ribosomal L22e protein family


Gene families : OG_42_0001702 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G232700
Cluster HCCA clusters: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
270704 No alias Ribosomal L22e protein family 0.07 Orthogroups_2024-Update
A4A49_00389 No alias 60s ribosomal protein l22-2 0.06 Orthogroups_2024-Update
At3g05560 No alias 60S ribosomal protein L22-2... 0.04 Orthogroups_2024-Update
Bradi1g18010 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
Bradi1g62830 No alias Ribosomal L22e protein family 0.03 Orthogroups_2024-Update
Brara.A03699.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C03109.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Brara.E03358.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.F02844.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre07.g357850 No alias Ribosomal L22e protein family 0.13 Orthogroups_2024-Update
GRMZM2G063617 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
GRMZM2G134107 No alias Ribosomal L22e protein family 0.04 Orthogroups_2024-Update
Glyma.02G017800 No alias Ribosomal L22e protein family 0.09 Orthogroups_2024-Update
HORVU2Hr1G019160.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
HORVU7Hr1G080630.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
LOC_Os03g22340 No alias 60S ribosomal protein L22-2, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g47710 No alias 60S ribosomal protein L22-2, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00024504-RA No alias (at3g05560 : 145.0) Ribosomal L22e protein family;... 0.05 Orthogroups_2024-Update
Potri.005G024400 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
Potri.010G012700 No alias Ribosomal L22e protein family 0.09 Orthogroups_2024-Update
Potri.013G015300 No alias Ribosomal L22e protein family 0.06 Orthogroups_2024-Update
Potri.014G128800 No alias Ribosomal L22e protein family 0.07 Orthogroups_2024-Update
Pp1s283_20V6 No alias 60s ribosomal protein 0.11 Orthogroups_2024-Update
Pp1s39_76V6 No alias 60s ribosomal protein 0.03 Orthogroups_2024-Update
Pp1s457_15V6 No alias 60s ribosomal protein 0.09 Orthogroups_2024-Update
Seita.2G429500.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.13 Orthogroups_2024-Update
Seita.9G409100.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.12 Orthogroups_2024-Update
Sobic.001G376600.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.002G414700.1 No alias component *(eL22) of large ribosomal-subunit (LSU) proteome 0.11 Orthogroups_2024-Update
Solyc01g099830 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** W9QTY3_9ROSA) 0.11 Orthogroups_2024-Update
Solyc09g075150 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.08 Orthogroups_2024-Update
Solyc09g075160 No alias 60S ribosomal protein L22-2 (AHRD V3.3 *** RL222_ARATH) 0.04 Orthogroups_2024-Update
Sopen01g043340 No alias Ribosomal L22e protein family 0.1 Orthogroups_2024-Update
Sopen09g029970 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
Sopen09g029980 No alias Ribosomal L22e protein family 0.05 Orthogroups_2024-Update
evm.model.contig_2121.19 No alias (at3g05560 : 87.0) Ribosomal L22e protein family;... 0.12 Orthogroups_2024-Update
evm.model.tig00001206.7 No alias (at3g05560 : 112.0) Ribosomal L22e protein family;... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0004576 oligosaccharyl transferase activity IEP Predicted GO
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0008250 oligosaccharyltransferase complex IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002671 Ribosomal_L22e 15 123
No external refs found!