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  5. Glyma.19G256200

Glyma.19G256200


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG_42_0000730 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.19G256200
Cluster HCCA clusters: Cluster_419

Target Alias Description ECC score Gene Family Method Actions
98090 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update
Bradi2g08020 No alias Protein with RING/U-box and TRAF-like domains 0.02 Orthogroups_2024-Update
HORVU3Hr1G032110.6 No alias E3 ubiquitin ligase *(SINA) 0.02 Orthogroups_2024-Update
LOC_Os01g13370 No alias seven in absentia protein family domain containing... 0.04 Orthogroups_2024-Update
LOC_Os05g14860 No alias seven in absentia protein family domain containing... 0.02 Orthogroups_2024-Update
MA_161463g0020 No alias (at3g58040 : 321.0) Encodes a RING finger domain... 0.04 Orthogroups_2024-Update
PSME_00051099-RA No alias (at3g61790 : 368.0) Protein with RING/U-box and... 0.02 Orthogroups_2024-Update
Seita.5G005200.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update
Sobic.003G005100.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update
Sobic.009G087800.1 No alias E3 ubiquitin ligase *(SINA) 0.03 Orthogroups_2024-Update
Solyc01g096020 No alias E3 ubiquitin-protein ligase (AHRD V3.3 *** K4AZZ1_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g023020 No alias Seven in absentia protein family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan predictions
BP GO:0007275 multicellular organism development IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0009719 response to endogenous stimulus IEP Predicted GO
BP GO:0009725 response to hormone IEP Predicted GO
BP GO:0010033 response to organic substance IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0042221 response to chemical IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 94 293
No external refs found!