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  5. Glyma.20G028400

Glyma.20G028400


Description : Protein of unknown function (DUF1336)


Gene families : OG_42_0001099 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G028400
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_11790 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Cre13.g571800 No alias Protein of unknown function (DUF1336) 0.01 Orthogroups_2024-Update
LOC_Os12g38850 No alias DUF1336 domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.3G364200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Solyc05g006660 No alias CW14 protein (DUF1336) (AHRD V3.3 *** AT1G59650.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR009769 EDR2_C 183 424
No external refs found!