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  5. Glyma.20G053500

Glyma.20G053500


Description : FAR1-related sequence 3


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G053500
Cluster HCCA clusters: Cluster_442

Target Alias Description ECC score Gene Family Method Actions
Bradi1g43021 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Bradi3g48330 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update
Glyma.13G341600 No alias FAR1-related sequence 4 0.04 Orthogroups_2024-Update
Glyma.20G024700 No alias FAR1-related sequence 6 0.04 Orthogroups_2024-Update
HORVU7Hr1G015880.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G225600.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
Sobic.001G149000.2 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G195550.1 No alias FRS/FRF-type transcription factor 0.05 Orthogroups_2024-Update
Solyc03g117520 No alias Protein FAR1-RELATED SEQUENCE 6 (AHRD V3.3 *** W9R3Q8_9ROSA) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 275 366
IPR007527 Znf_SWIM 559 587
IPR004330 FAR1_DNA_bnd_dom 60 135
No external refs found!