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  5. Glyma.20G078900

Glyma.20G078900


Description : Serinc-domain containing serine and sphingolipid biosynthesis protein


Gene families : OG_42_0001935 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001935_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G078900
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
85365 No alias Serinc-domain containing serine and sphingolipid... 0.03 Orthogroups_2024-Update
Brara.H00517.1 No alias Unknown function 0.04 Orthogroups_2024-Update
PSME_00024569-RA No alias (at4g13345 : 482.0) maternal effect embryo arrest 55... 0.02 Orthogroups_2024-Update
Sopen01g041260 No alias Serine incorporator (Serinc) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016846 carbon-sulfur lyase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 44 409
No external refs found!