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  5. Glyma.20G092100

Glyma.20G092100


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009274 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009274_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G092100
Cluster HCCA clusters: Cluster_326


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
BP GO:0007051 spindle organization IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0051225 spindle assembly IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
CC GO:0070652 HAUS complex IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 403 429
IPR002885 Pentatricopeptide_repeat 370 398
IPR002885 Pentatricopeptide_repeat 438 461
IPR002885 Pentatricopeptide_repeat 578 607
IPR002885 Pentatricopeptide_repeat 647 675
IPR002885 Pentatricopeptide_repeat 194 241
IPR002885 Pentatricopeptide_repeat 269 313
No external refs found!