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  5. Glyma.20G124800

Glyma.20G124800


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG_42_0000370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G124800
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
420592 No alias RING/FYVE/PHD zinc finger superfamily protein 0.05 Orthogroups_2024-Update
A4A49_35322 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.G01422.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.J00118.1 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G023755 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G113619 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 Orthogroups_2024-Update
Glyma.02G013000 No alias RING/FYVE/PHD zinc finger superfamily protein 0.06 Orthogroups_2024-Update
Glyma.02G107500 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 Orthogroups_2024-Update
HORVU1Hr1G052850.6 No alias E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
LOC_Os08g33860 No alias zinc finger, C3HC4 type, putative, expressed 0.02 Orthogroups_2024-Update
MA_202212g0010 No alias (at5g62460 : 145.0) RING/FYVE/PHD zinc finger... 0.01 Orthogroups_2024-Update
MA_877696g0010 No alias (at3g47550 : 100.0) RING/FYVE/PHD zinc finger... 0.02 Orthogroups_2024-Update
Potri.013G126600 No alias RING/FYVE/PHD zinc finger superfamily protein 0.04 Orthogroups_2024-Update
Potri.014G121900 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 Orthogroups_2024-Update
Seita.8G176200.1 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sobic.004G190700.3 No alias E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Sopen01g031300 No alias Protein of unknown function (DUF3675) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
InterPro domains Description Start Stop
IPR022143 DUF3675 113 229
IPR011016 Znf_RING-CH 62 107
No external refs found!