Glyma.20G142200

Description : protodermal factor 2

Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.20G142200
Cluster	HCCA clusters: Cluster_346

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g51540	No alias	homeodomain GLABROUS 1	0.03	Orthogroups_2024-Update
Glyma.13G288800	No alias	homeodomain GLABROUS 2	0.03	Orthogroups_2024-Update
Sopen02g024970	No alias	START domain	0.03	Orthogroups_2024-Update
Sopen06g015560	No alias	START domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008289	lipid binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006260	DNA replication	IEP	Predicted GO
BP	GO:0006310	DNA recombination	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002913	START_lipid-bd_dom	257	470
IPR001356	Homeobox_dom	48	103

External Links

No external refs found!