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  5. Glyma.20G144700

Glyma.20G144700


Description : photosystem I subunit D-2


Gene families : OG_42_0006268 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006268_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G144700
Cluster HCCA clusters: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
A4A49_07455 No alias photosystem i reaction center subunit ii, chloroplastic 0.12 Orthogroups_2024-Update
A4A49_20575 No alias photosystem i reaction center subunit ii, chloroplastic 0.07 Orthogroups_2024-Update
At1g03130 No alias Photosystem I reaction center subunit II-2,... 0.03 Orthogroups_2024-Update
At4g02770 No alias Photosystem I reaction center subunit II-1,... 0.05 Orthogroups_2024-Update
Bradi1g04700 No alias photosystem I subunit D-2 0.07 Orthogroups_2024-Update
Brara.I00185.1 No alias component *(PsaD) of PS-I complex 0.1 Orthogroups_2024-Update
Cre05.g238332 No alias photosystem I subunit D-2 0.08 Orthogroups_2024-Update
GRMZM2G024150 No alias photosystem I subunit D-2 0.04 Orthogroups_2024-Update
HORVU5Hr1G109710.1 No alias component *(PsaD) of PS-I complex 0.07 Orthogroups_2024-Update
Kfl00193_0150 kfl00193_0150_v1.1 (p12353|psad_spiol : 246.0) Photosystem I reaction... 0.08 Orthogroups_2024-Update
MA_9169733g0010 No alias (p32869|psad_cucsa : 194.0) Photosystem I reaction... 0.04 Orthogroups_2024-Update
Mp5g04200.1 No alias component PsaD of PS-I complex 0.06 Orthogroups_2024-Update
Potri.008G151600 No alias photosystem I subunit D-2 0.03 Orthogroups_2024-Update
Pp1s1_788V6 No alias psi reaction center subunit ii 0.15 Orthogroups_2024-Update
Pp1s4_321V6 No alias psi reaction center subunit ii 0.09 Orthogroups_2024-Update
Pp1s77_69V6 No alias psi reaction center subunit ii 0.1 Orthogroups_2024-Update
Seita.9G045100.1 No alias component *(PsaD) of PS-I complex 0.05 Orthogroups_2024-Update
Sobic.001G046900.1 No alias component *(PsaD) of PS-I complex 0.1 Orthogroups_2024-Update
Solyc06g054260 No alias photosystem 1 reaction center protein subunit 2 0.09 Orthogroups_2024-Update
Sopen06g019380 No alias PsaD 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009538 photosystem I reaction center IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0004061 arylformamidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004418 hydroxymethylbilane synthase activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016849 phosphorus-oxygen lyase activity IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003685 PsaD 71 201
No external refs found!