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  5. Solyc02g089540

Solyc02g089540


Description : CONSTANS 1


Gene families : OG_42_0000725 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g089540
Cluster HCCA clusters: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
102790 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
102902 No alias CONSTANS-like 5 0.03 Orthogroups_2024-Update
185898 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
A4A49_03485 No alias zinc finger protein constans-like 4 0.04 Orthogroups_2024-Update
A4A49_38110 No alias zinc finger protein constans-like 2 0.09 Orthogroups_2024-Update
At2g24790 No alias Zinc finger protein CONSTANS-LIKE 3... 0.03 Orthogroups_2024-Update
At3g02380 No alias Zinc finger protein CONSTANS-LIKE 2... 0.09 Orthogroups_2024-Update
At5g15850 No alias Zinc finger protein CONSTANS-LIKE 1... 0.07 Orthogroups_2024-Update
At5g24930 No alias Zinc finger protein CONSTANS-LIKE 4... 0.06 Orthogroups_2024-Update
At5g57660 No alias Zinc finger protein CONSTANS-LIKE 5... 0.03 Orthogroups_2024-Update
Bradi1g31280 No alias CONSTANS-like 4 0.04 Orthogroups_2024-Update
Bradi3g48447 No alias CONSTANS-like 3 0.03 Orthogroups_2024-Update
Brara.A03895.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Brara.B00625.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Brara.D01502.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.05 Orthogroups_2024-Update
Brara.F02700.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.06 Orthogroups_2024-Update
Brara.I00559.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.07 Orthogroups_2024-Update
Brara.J01926.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.04 Orthogroups_2024-Update
Cre12.g534100 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
GRMZM2G038783 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
Glyma.04G058900 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
Glyma.06G059600 No alias CONSTANS-like 4 0.03 Orthogroups_2024-Update
Glyma.08G255200 No alias CONSTANS-like 2 0.03 Orthogroups_2024-Update
Glyma.13G093800 No alias CONSTANS-like 5 0.04 Orthogroups_2024-Update
Glyma.18G278100 No alias CONSTANS-like 2 0.06 Orthogroups_2024-Update
LOC_Os04g42020 No alias CCT/B-box zinc finger protein, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os06g44450 No alias CCT/B-box zinc finger protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g06464 No alias CCT/B-box zinc finger protein, putative, expressed 0.06 Orthogroups_2024-Update
MA_7292g0010 No alias (at5g24930 : 245.0) CONSTANS-like 4 (COL4); FUNCTIONS... 0.03 Orthogroups_2024-Update
Potri.017G107500 No alias CONSTANS-like 2 0.07 Orthogroups_2024-Update
Potri.T094400 No alias CONSTANS-like 5 0.05 Orthogroups_2024-Update
Pp1s364_5V6 No alias col3 gene for putative COSTANS-like 3 protein COL3 0.02 Orthogroups_2024-Update
Pp1s371_27V6 No alias col1 gene for putative CONSTANS-like 1 protein COL1 0.02 Orthogroups_2024-Update
Pp1s97_109V6 No alias col2 gene for putative CONSTANS-like 2 protein COL2 0.04 Orthogroups_2024-Update
Seita.1G228800.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.05 Orthogroups_2024-Update
Seita.4G192300.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.05 Orthogroups_2024-Update
Seita.7G153500.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.05 Orthogroups_2024-Update
Sobic.004G211200.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.04 Orthogroups_2024-Update
Sobic.006G135100.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G214000.1 No alias floral promoter *(CONSTANS) & BBX class-I transcription factor 0.05 Orthogroups_2024-Update
Solyc12g096500 No alias CONSTANS-like protein (AHRD V3.3 *** Q0MQL9_SOLTU) 0.03 Orthogroups_2024-Update
Sopen02g034260 No alias CCT motif 0.17 Orthogroups_2024-Update
Sopen07g002740 No alias CCT motif 0.03 Orthogroups_2024-Update
Sopen12g032330 No alias CCT motif 0.08 Orthogroups_2024-Update
evm.model.contig_3458.11 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004014 adenosylmethionine decarboxylase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004512 inositol-3-phosphate synthase activity IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006021 inositol biosynthetic process IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006595 polyamine metabolic process IEP Predicted GO
BP GO:0006596 polyamine biosynthetic process IEP Predicted GO
BP GO:0006597 spermine biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006814 sodium ion transport IEP Predicted GO
BP GO:0008215 spermine metabolic process IEP Predicted GO
BP GO:0008216 spermidine metabolic process IEP Predicted GO
BP GO:0008295 spermidine biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009309 amine biosynthetic process IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
BP GO:0042401 cellular biogenic amine biosynthetic process IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0046165 alcohol biosynthetic process IEP Predicted GO
BP GO:0046173 polyol biosynthetic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0097164 ammonium ion metabolic process IEP Predicted GO
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 322 364
IPR000315 Znf_B-box 53 99
No external refs found!