Glyma.20G215700

Description : cytokinin response factor 4

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.20G215700
Cluster	HCCA clusters: Cluster_348

Target	Alias	Description	ECC score	Gene Family Method
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.02	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.02	Orthogroups_2024-Update
At3g14230	No alias	Ethylene-responsive transcription factor RAP2-2...	0.03	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.03	Orthogroups_2024-Update
At5g51990	No alias	C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]	0.03	Orthogroups_2024-Update
Brara.I01208.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Glyma.02G267400	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.03G255500	No alias	cytokinin response factor 4	0.04	Orthogroups_2024-Update
Glyma.16G023800	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g31580	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
Mp1g20040.1	No alias	transcription factor (ERF)	0.03	Orthogroups_2024-Update
PSME_00055510-RA	No alias	(at1g19210 : 129.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.005G223200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.006G238600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.013G158500	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s112_23V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s21_214V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Seita.2G138200.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G225700.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G103000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	Predicted GO
MF	GO:0005198	structural molecule activity	IEP	Predicted GO
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005743	mitochondrial inner membrane	IEP	Predicted GO
CC	GO:0005840	ribosome	IEP	Predicted GO
BP	GO:0006412	translation	IEP	Predicted GO
BP	GO:0006518	peptide metabolic process	IEP	Predicted GO
BP	GO:0009058	biosynthetic process	IEP	Predicted GO
BP	GO:0009059	macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0015858	nucleoside transport	IEP	Predicted GO
BP	GO:0015931	nucleobase-containing compound transport	IEP	Predicted GO
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Predicted GO
CC	GO:0019866	organelle inner membrane	IEP	Predicted GO
BP	GO:0022900	electron transport chain	IEP	Predicted GO
CC	GO:0031090	organelle membrane	IEP	Predicted GO
CC	GO:0031966	mitochondrial membrane	IEP	Predicted GO
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Predicted GO
BP	GO:0043043	peptide biosynthetic process	IEP	Predicted GO
CC	GO:0043228	non-membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO
BP	GO:0043604	amide biosynthetic process	IEP	Predicted GO
BP	GO:0044249	cellular biosynthetic process	IEP	Predicted GO
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0070469	respiratory chain	IEP	Predicted GO
BP	GO:1901264	carbohydrate derivative transport	IEP	Predicted GO
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Predicted GO
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO
BP	GO:1901642	nucleoside transmembrane transport	IEP	Predicted GO
CC	GO:1990904	ribonucleoprotein complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	80	130

External Links

No external refs found!

Glyma.20G215700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation