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  5. Glyma.20G224300

Glyma.20G224300


Description : calmodulin 8


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G224300
Cluster HCCA clusters: Cluster_322

Target Alias Description ECC score Gene Family Method Actions
107557 No alias calmodulin 5 0.03 Orthogroups_2024-Update
A4A49_24311 No alias calmodulin-like protein 8 0.02 Orthogroups_2024-Update
Bradi1g09042 No alias calmodulin 4 0.03 Orthogroups_2024-Update
Brara.C03895.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Brara.G02648.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.03 Orthogroups_2024-Update
Glyma.19G121900 No alias calmodulin 5 0.04 Orthogroups_2024-Update
HORVU3Hr1G079210.9 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update
LOC_Os01g17190 No alias OsCam3 - Calmodulin, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g03980 No alias OsCML2 - Calmodulin-related calcium sensor protein, expressed 0.02 Orthogroups_2024-Update
Potri.008G159300 No alias calmodulin-like 11 0.03 Orthogroups_2024-Update
Potri.013G040300 No alias calmodulin-like 11 0.04 Orthogroups_2024-Update
Seita.7G311400.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Sobic.005G024300.1 No alias calcium sensor *(CML) 0.03 Orthogroups_2024-Update
Solyc01g105630 No alias Calmodulin, putative (AHRD V3.3 *** B9S4P7_RICCO) 0.03 Orthogroups_2024-Update
Solyc06g053930 No alias Calmodulin, putative (AHRD V3.3 *** B9RTI5_RICCO) 0.03 Orthogroups_2024-Update
Solyc10g081170 No alias Calmodulin 2 0.04 Orthogroups_2024-Update
Sopen10g031670 No alias EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 84 147
IPR002048 EF_hand_dom 15 74
No external refs found!