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  5. Glyma.20G225600

Glyma.20G225600


Description : prenylated RAB acceptor 1.E


Gene families : OG_42_0000375 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G225600
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
271785 No alias prenylated RAB acceptor 1.B1 0.03 Orthogroups_2024-Update
A4A49_02597 No alias pra1 family protein d 0.01 Orthogroups_2024-Update
A4A49_38927 No alias pra1 family protein b4 0.02 Orthogroups_2024-Update
At2g38360 No alias PRA1 family protein B4 [Source:UniProtKB/Swiss-Prot;Acc:O80915] 0.02 Orthogroups_2024-Update
Brara.C01932.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
Brara.F00553.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
GRMZM2G147862 No alias prenylated RAB acceptor 1.E 0.03 Orthogroups_2024-Update
GRMZM2G322001 No alias PRA1 (Prenylated rab acceptor) family protein 0.01 Orthogroups_2024-Update
HORVU0Hr1G013770.1 No alias B-G-class Rab-GDF protein 0.03 Orthogroups_2024-Update
LOC_Os03g53070 No alias prenylated rab acceptor, putative, expressed 0.01 Orthogroups_2024-Update
Potri.002G043800 No alias PRA1 (Prenylated rab acceptor) family protein 0.01 Orthogroups_2024-Update
Potri.010G183300 No alias prenylated RAB acceptor 1.B4 0.01 Orthogroups_2024-Update
Potri.016G126400 No alias prenylated RAB acceptor 1.B4 0.01 Orthogroups_2024-Update
Sobic.001G259500.1 No alias B-G-class Rab-GDF protein 0.01 Orthogroups_2024-Update
Solyc06g050570 No alias PRA1 family protein (AHRD V3.3 *** K4C5K1_SOLLC) 0.02 Orthogroups_2024-Update
Sopen09g008440 No alias PRA1 family protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
BP GO:0010024 phytochromobilin biosynthetic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
MF GO:0050897 cobalt ion binding IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
BP GO:0051202 phytochromobilin metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 34 173
No external refs found!