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  5. Glyma.20G231900

Glyma.20G231900


Description : RING/U-box superfamily protein


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.20G231900
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_09968 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
A4A49_21361 No alias ring-h2 finger protein atl78 0.03 Orthogroups_2024-Update
A4A49_29197 No alias ring-h2 finger protein atl73 0.04 Orthogroups_2024-Update
A4A49_37314 No alias e3 ubiquitin-protein ligase atl9 0.08 Orthogroups_2024-Update
At1g53820 No alias RING-H2 finger protein ATL60... 0.03 Orthogroups_2024-Update
Bradi1g29611 No alias RING-H2 finger A3A 0.06 Orthogroups_2024-Update
Bradi3g60770 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.D02285.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G028234 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G140800 No alias carbon/nitrogen insensitive 1 0.03 Orthogroups_2024-Update
Glyma.13G292600 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Glyma.18G227700 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
HORVU6Hr1G091610.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
HORVU7Hr1G107430.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Kfl00495_0060 kfl00495_0060_v1.1 no hits & (original description: no original description) 0.01 Orthogroups_2024-Update
LOC_Os06g09310 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
Seita.1G195400.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.05 Orthogroups_2024-Update
Seita.3G272800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Seita.4G173000.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.06 Orthogroups_2024-Update
Seita.5G363700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.003G299800.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.004G109400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.004G170300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g088450 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G53820.1) 0.03 Orthogroups_2024-Update
Solyc01g096650 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT5G07040.1) 0.03 Orthogroups_2024-Update
Solyc11g005290 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G49230.1) 0.03 Orthogroups_2024-Update
Sopen01g045970 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen06g022910 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 117 160
No external refs found!