1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen10g023690

Sopen10g023690


Description : Leucine rich repeat


Gene families : OG_42_0000642 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g023690
Cluster HCCA clusters: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
At1g33590 No alias Leucine-rich repeat (LRR) family protein... 0.03 Orthogroups_2024-Update
At5g06870 No alias PGIP2 [Source:UniProtKB/TrEMBL;Acc:A0A178UDM1] 0.03 Orthogroups_2024-Update
Brara.C00272.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Brara.E02866.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update
Brara.J02539.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update
Glyma.15G209200 No alias polygalacturonase inhibiting protein 1 0.02 Orthogroups_2024-Update
Potri.006G058600 No alias polygalacturonase inhibiting protein 1 0.03 Orthogroups_2024-Update
Seita.2G357900.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.02 Orthogroups_2024-Update
Seita.3G071500.1 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update
Sobic.009G002400.2 No alias pathogen polygalacturonase inhibitor *(PGIP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 175 234
IPR001611 Leu-rich_rpt 249 307
IPR013210 LRR_N_plant-typ 32 69
No external refs found!