Solyc02g089610

Description : S-adenosylmethionine decarboxylase 2

Gene families : OG_42_0001259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001259_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g089610
Cluster	HCCA clusters: Cluster_17

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21239	No alias	s-adenosylmethionine decarboxylase proenzyme	0.07	Orthogroups_2024-Update
A4A49_31954	No alias	s-adenosylmethionine decarboxylase proenzyme	0.07	Orthogroups_2024-Update
At3g02470	No alias	S-adenosylmethionine decarboxylase proenzyme 1...	0.09	Orthogroups_2024-Update
At5g15950	No alias	S-adenosylmethionine decarboxylase proenzyme 2...	0.09	Orthogroups_2024-Update
Bradi5g14640	No alias	Adenosylmethionine decarboxylase family protein	0.03	Orthogroups_2024-Update
Brara.A03903.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Brara.C02987.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.09	Orthogroups_2024-Update
Cre03.g205900	No alias	S-adenosylmethionine decarboxylase	0.01	Orthogroups_2024-Update
GRMZM2G125635	No alias	Adenosylmethionine decarboxylase family protein	0.05	Orthogroups_2024-Update
Glyma.01G071300	No alias	Adenosylmethionine decarboxylase family protein	0.06	Orthogroups_2024-Update
Glyma.02G128000	No alias	Adenosylmethionine decarboxylase family protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G086140.5	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.06	Orthogroups_2024-Update
HORVU6Hr1G056110.3	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
MA_9879049g0010	No alias	(q9axe3\|dcam_dauca : 330.0) S-adenosylmethionine...	0.02	Orthogroups_2024-Update
Potri.017G108800	No alias	S-adenosylmethionine decarboxylase	0.03	Orthogroups_2024-Update
Pp1s187_30V6	No alias	s-adenosylmethionine decarboxylase	0.06	Orthogroups_2024-Update
Pp1s335_22V6	No alias	s-adenosylmethionine decarboxylase	0.04	Orthogroups_2024-Update
Seita.1G229400.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.03	Orthogroups_2024-Update
Seita.7G154200.1	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.04	Orthogroups_2024-Update
Sobic.006G135600.4	No alias	S-adenosyl methionine decarboxylase & EC_4.1 carbon-carbon lyase	0.05	Orthogroups_2024-Update
Sopen02g034330	No alias	Adenosylmethionine decarboxylase	0.17	Orthogroups_2024-Update
Sopen05g006210	No alias	Adenosylmethionine decarboxylase	0.08	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEA	InterProScan predictions
BP	GO:0006576	cellular biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006596	polyamine biosynthetic process	None	Extended
BP	GO:0006597	spermine biosynthetic process	IEA	InterProScan predictions
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008215	spermine metabolic process	None	Extended
BP	GO:0008216	spermidine metabolic process	None	Extended
BP	GO:0008295	spermidine biosynthetic process	IEA	InterProScan predictions
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009309	amine biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042401	cellular biogenic amine biosynthetic process	None	Extended
BP	GO:0044106	cellular amine metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0097164	ammonium ion metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003849	3-deoxy-7-phosphoheptulonate synthase activity	IEP	Predicted GO
MF	GO:0004512	inositol-3-phosphate synthase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
BP	GO:0006020	inositol metabolic process	IEP	Predicted GO
BP	GO:0006021	inositol biosynthetic process	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006814	sodium ion transport	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
BP	GO:0015696	ammonium transport	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
MF	GO:0016987	sigma factor activity	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
BP	GO:0046165	alcohol biosynthetic process	IEP	Predicted GO
BP	GO:0046173	polyol biosynthetic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0050789	regulation of biological process	IEP	Predicted GO
BP	GO:0050794	regulation of cellular process	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	Predicted GO
MF	GO:2001070	starch binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001985	S-AdoMet_decarboxylase	9	333

External Links

No external refs found!

Solyc02g089610

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation