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  5. Glyma.U005000

Glyma.U005000


Description : target of AVRB operation1


Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.U005000
Cluster HCCA clusters: Cluster_326

Target Alias Description ECC score Gene Family Method Actions
A4A49_29289 No alias tmv resistance protein n 0.04 Orthogroups_2024-Update
A4A49_33079 No alias tmv resistance protein n 0.03 Orthogroups_2024-Update
At1g63880 No alias Disease resistance protein RML1B... 0.03 Orthogroups_2024-Update
Brara.B00741.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.03G053300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.03G087600 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Glyma.16G159400 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.07 Orthogroups_2024-Update
PSME_00031650-RA No alias (at5g36930 : 116.0) Disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00041991-RA No alias (at1g27180 : 111.0) disease resistance protein... 0.02 Orthogroups_2024-Update
PSME_00043800-RA No alias (at5g36930 : 119.0) Disease resistance protein... 0.03 Orthogroups_2024-Update
Potri.002G056050 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.002G056100 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Orthogroups_2024-Update
Potri.013G097200 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.017G103800 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Orthogroups_2024-Update
Potri.019G070300 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.04 Orthogroups_2024-Update
Potri.T010500 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T038300 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Orthogroups_2024-Update
Potri.T069201 No alias transmembrane receptors;ATP binding 0.03 Orthogroups_2024-Update
Solyc05g024350 No alias LOW QUALITY:NBS-LRR resistance protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g097000 No alias TIR-NBS-LRR class disease resistance protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen07g003140 No alias hypothetical protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000157 TIR_dom 43 176
No external refs found!