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  5. A4A49_00457

A4A49_00457


Description : laccase-3


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_00457
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
230356 No alias laccase 12 0.03 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.07 Orthogroups_2024-Update
Bradi2g54740 No alias laccase 2 0.06 Orthogroups_2024-Update
GRMZM2G132169 No alias laccase 12 0.04 Orthogroups_2024-Update
LOC_Os02g51440 No alias laccase precursor protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_10428927g0020 No alias (at5g05390 : 676.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_192698g0010 No alias (at5g05390 : 734.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
MA_28768g0010 No alias (at2g38080 : 580.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
MA_812936g0010 No alias (at5g05390 : 539.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00001502-RA No alias (at2g38080 : 615.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
PSME_00010271-RA No alias (at5g05390 : 664.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00023647-RA No alias (at5g60020 : 698.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00024478-RA No alias (at5g05390 : 702.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00026986-RA No alias (at5g05390 : 621.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00031239-RA No alias (at1g18140 : 634.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044448-RA No alias (at5g05390 : 808.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Potri.007G023300 No alias laccase 11 0.02 Orthogroups_2024-Update
Seita.3G218000.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Seita.5G365900.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Seita.5G457800.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Sobic.001G422300.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001117 Cu-oxidase 164 312
IPR011706 Cu-oxidase_2 420 553
IPR011707 Cu-oxidase_3 38 152
No external refs found!