1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_00699

A4A49_00699


Description : pre-mrna-splicing factor atp-dependent rna helicase deah7


Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_00699
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
82212 No alias RNA helicase family protein 0.02 Orthogroups_2024-Update
At3g26560 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.04 Orthogroups_2024-Update
Bradi1g61220 No alias RNA helicase family protein 0.04 Orthogroups_2024-Update
Bradi3g13460 No alias ATP-dependent RNA helicase, putative 0.03 Orthogroups_2024-Update
Glyma.01G142700 No alias RNA helicase family protein 0.03 Orthogroups_2024-Update
Glyma.06G201700 No alias RNA helicase family protein 0.03 Orthogroups_2024-Update
Glyma.13G342400 No alias RNA helicase family protein 0.03 Orthogroups_2024-Update
Glyma.17G256200 No alias ATP-dependent RNA helicase, putative 0.03 Orthogroups_2024-Update
Kfl00020_0480 kfl00020_0480_v1.1 (at3g26560 : 1414.0) ATP-dependent RNA helicase,... 0.02 Orthogroups_2024-Update
Kfl00085_0100 kfl00085_0100_v1.1 (at1g32490 : 1214.0) Encodes a homolog of the yeast PRP2... 0.03 Orthogroups_2024-Update
Mp2g13680.1 No alias Probable pre-mRNA-splicing factor ATP-dependent RNA... 0.02 Orthogroups_2024-Update
Potri.010G057200 No alias RNA helicase family protein 0.04 Orthogroups_2024-Update
Potri.010G172500 No alias RNA helicase family protein 0.02 Orthogroups_2024-Update
Pp1s22_343V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s38_83V6 No alias atp-dependent rna 0.03 Orthogroups_2024-Update
Pp1s89_224V6 No alias deah (asp-glu-ala-his) box polypeptide 8 0.03 Orthogroups_2024-Update
evm.model.tig00021589.29 No alias (at3g26560 : 868.0) ATP-dependent RNA helicase,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004386 helicase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011709 DUF1605 1129 1206
IPR011545 DEAD/DEAH_box_helicase_dom 598 746
IPR007502 Helicase-assoc_dom 985 1071
IPR001650 Helicase_C 792 921
No external refs found!