A4A49_00869

Description : putative pre-mrna-splicing factor atp-dependent rna helicase deah2

Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_00869
Cluster	HCCA clusters: Cluster_125

Target	Alias	Description	ECC score	Gene Family Method
At3g62310	No alias	Probable pre-mRNA-splicing factor ATP-dependent RNA...	0.03	Orthogroups_2024-Update
Cre03.g182950	No alias	RNA helicase family protein	0.02	Orthogroups_2024-Update
Solyc01g110990	No alias	RNA helicase DEAH-box6	0.05	Orthogroups_2024-Update
Sopen07g019130	No alias	Oligonucleotide/oligosaccharide-binding (OB)-fold	0.03	Orthogroups_2024-Update
Sopen10g028600	No alias	Helicase associated domain (HA2)	0.02	Orthogroups_2024-Update
evm.model.tig00021589.28	No alias	(at3g26560 : 335.0) ATP-dependent RNA helicase,...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	266	400
IPR007502	Helicase-assoc_dom	463	551
IPR011709	DUF1605	613	689
IPR003593	AAA+_ATPase	73	215

External Links

No external refs found!