A4A49_01155


Description : transcription factor tga1


Gene families : OG_42_0000327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000327_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_01155
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
HORVU0Hr1G015710.1 No alias TGA-type transcription factor 0.03 Orthogroups_2024-Update
HORVU7Hr1G042170.4 No alias NPR1-interactive transcription factor *(TGA) & TGA-type... 0.03 Orthogroups_2024-Update
LOC_Os01g59350 No alias transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.003G329500.1 No alias NPR1-interactive transcription factor *(TGA) & TGA-type... 0.03 Orthogroups_2024-Update
Solyc12g056860 No alias bZIP transcription factor family protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen10g031310 No alias Seed dormancy control 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006351 transcription, DNA-templated IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004827 bZIP 81 111
IPR025422 TGA_domain 167 240
No external refs found!