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  5. A4A49_01261

A4A49_01261


Description : pentatricopeptide repeat-containing protein, mitochondrial


Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_01261
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AC216235.2_FG010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Orthogroups_2024-Update
At5g66520 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.02 Orthogroups_2024-Update
Brara.H03086.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G057130.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU7Hr1G090460.2 No alias Unknown function 0.05 Orthogroups_2024-Update
MA_62181g0010 No alias (at4g18750 : 546.0) Encodes a pentatricopeptide (PPR)... 0.03 Orthogroups_2024-Update
Pp1s48_253V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.04 Orthogroups_2024-Update
Solyc09g092150 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 800 921
IPR002885 Pentatricopeptide_repeat 698 723
IPR002885 Pentatricopeptide_repeat 598 621
IPR002885 Pentatricopeptide_repeat 626 670
IPR002885 Pentatricopeptide_repeat 522 570
IPR002885 Pentatricopeptide_repeat 453 499
IPR002885 Pentatricopeptide_repeat 320 362
No external refs found!