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  5. Sopen10g025270

Sopen10g025270


Description : hAT family C-terminal dimerisation region


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g025270
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
Glyma.09G104100 No alias hAT transposon superfamily 0.02 Orthogroups_2024-Update
Glyma.19G069000 No alias hAT transposon superfamily 0.03 Orthogroups_2024-Update
LOC_Os01g28200 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g30960 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g15420 No alias transposon protein, putative, Ac/Ds sub-class, expressed 0.02 Orthogroups_2024-Update
PSME_00029930-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc06g048690 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g009120 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 20 99
No external refs found!