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  5. A4A49_02254

A4A49_02254


Description : abc transporter b family member 11


Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_02254
Cluster HCCA clusters: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
123915 No alias P-glycoprotein 11 0.02 Orthogroups_2024-Update
74892 No alias P-glycoprotein 21 0.02 Orthogroups_2024-Update
Bradi2g36897 No alias ATP binding cassette subfamily B4 0.03 Orthogroups_2024-Update
Brara.I00320.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Glyma.16G078100 No alias ABC transporter family protein 0.03 Orthogroups_2024-Update
Glyma.18G012700 No alias P-glycoprotein 18 0.03 Orthogroups_2024-Update
Glyma.19G021500 No alias ATP binding cassette subfamily B19 0.03 Orthogroups_2024-Update
Glyma.19G184300 No alias ATP binding cassette subfamily B1 0.03 Orthogroups_2024-Update
Kfl00023_0200 kfl00023_0200_v1.1 (at3g62150 : 1239.0) P-glycoprotein 21 (PGP21);... 0.01 Orthogroups_2024-Update
MA_138894g0010 No alias (at2g47000 : 1332.0) Multidrug resistance ... 0.03 Orthogroups_2024-Update
Mp2g11920.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
PSME_00014276-RA No alias (at3g55320 : 2001.0) P-glycoprotein 20 (PGP20);... 0.03 Orthogroups_2024-Update
PSME_00016535-RA No alias (at3g28860 : 1775.0) Belongs to the family of... 0.03 Orthogroups_2024-Update
PSME_00023028-RA No alias (at3g28345 : 1461.0) ABC transporter family protein;... 0.02 Orthogroups_2024-Update
PSME_00023263-RA No alias (q6yuu5|mdr_orysa : 1044.0) Putative multidrug... 0.03 Orthogroups_2024-Update
PSME_00030174-RA No alias (at2g47000 : 1538.0) Multidrug resistance ... 0.03 Orthogroups_2024-Update
PSME_00035518-RA No alias (at2g39480 : 1505.0) P-glycoprotein 6 (PGP6); FUNCTIONS... 0.04 Orthogroups_2024-Update
PSME_00039058-RA No alias (q6yuu5|mdr_orysa : 1225.0) Putative multidrug... 0.03 Orthogroups_2024-Update
Pp1s29_108V6 No alias multidrug pheromone mdr abc transporter family 0.03 Orthogroups_2024-Update
Pp1s338_12V6 No alias multidrug pheromone mdr abc transporter family 0.02 Orthogroups_2024-Update
Seita.5G283600.1 No alias subfamily ABCB transporter 0.03 Orthogroups_2024-Update
Sobic.009G034500.1 No alias subfamily ABCB transporter 0.02 Orthogroups_2024-Update
Solyc03g093650 No alias ABC transporter B family protein (AHRD V3.3 *** A0A072UBK0_MEDTR) 0.03 Orthogroups_2024-Update
Sopen02g032160 No alias ABC transporter transmembrane region 0.03 Orthogroups_2024-Update
evm.model.tig00000025.1 No alias (at2g47000 : 429.0) Multidrug resistance P-glycoprotein... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 402 551
IPR011527 ABC1_TM_dom 105 333
IPR011527 ABC1_TM_dom 698 967
IPR003439 ABC_transporter-like 1040 1187
No external refs found!