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  5. A4A49_03613

A4A49_03613


Description : chaperone protein clpb1


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_03613
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
170696 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
174539 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
At1g74310 No alias Chaperone protein ClpB1 [Source:UniProtKB/Swiss-Prot;Acc:P42730] 0.02 Orthogroups_2024-Update
At4g14670 No alias Putative chaperone protein ClpB2, chloroplastic... 0.02 Orthogroups_2024-Update
Cre10.g465550 No alias Clp ATPase 0.01 Orthogroups_2024-Update
GRMZM2G130121 No alias casein lytic proteinase B3 0.02 Orthogroups_2024-Update
Glyma.17G077500 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
HORVU4Hr1G014120.2 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update
HORVU5Hr1G081860.4 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.02 Orthogroups_2024-Update
Seita.1G177700.1 No alias chaperone component *(ClpD) of chloroplast Clp-type... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004176 Clp_N 97 147
IPR004176 Clp_N 17 67
IPR003959 ATPase_AAA_core 205 318
IPR003959 ATPase_AAA_core 598 762
IPR019489 Clp_ATPase_C 768 847
No external refs found!