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  5. Sopen10g026600

Sopen10g026600


Description : Retrotransposon gag protein


Gene families : OG_42_0003222 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003222_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g026600

Target Alias Description ECC score Gene Family Method Actions
Sopen01g020380 No alias Integrase core domain 0.03 Orthogroups_2024-Update
Sopen04g019980 No alias Retrotransposon gag protein 0.05 Orthogroups_2024-Update
Sopen12g018790 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 150 240
No external refs found!