A4A49_04981

Description : protein argonaute pnh1

Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_04981
Cluster	HCCA clusters: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method	Actions
Brara.J01515.1	No alias	siRNA-integrating factor *(AGO)	0.02	Orthogroups_2024-Update
Solyc03g111760	No alias	Argonaute15	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR014811	ArgoL1	242	291
IPR032473	Argonaute_Mid_dom	491	568
IPR032474	Argonaute_N	99	232
IPR003165	Piwi	583	902
IPR032472	ArgoL2	436	480
IPR003100	PAZ_dom	306	424

External Links

No external refs found!