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  5. A4A49_05017

A4A49_05017


Description : heterogeneous nuclear ribonucleoprotein 1


Gene families : OG_42_0000197 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_05017
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Bradi3g08380 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
GRMZM2G014400 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
GRMZM2G050218 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G040220.1 No alias Unknown function 0.03 Orthogroups_2024-Update
PSME_00048649-RA No alias (at3g07810 : 303.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
Potri.008G170400 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Sobic.002G355300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc11g012470 No alias RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 69
IPR000504 RRM_dom 110 166
No external refs found!