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  5. A4A49_05085

A4A49_05085


Description : dna-directed rna polymerase iii subunit 2


Gene families : OG_42_0000798 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000798_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_05085
Cluster HCCA clusters: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Bradi2g05777 No alias nuclear RNA polymerase D2A 0.02 Orthogroups_2024-Update
Cre12.g542800 No alias nuclear RNA polymerase C2 0.03 Orthogroups_2024-Update
Kfl00026_0050 kfl00026_0050_v1.1 (at5g45140 : 1509.0) Encodes a subunit of RNA polymerase... 0.01 Orthogroups_2024-Update
Seita.7G258200.1 No alias component *(NRPE2) of RNA polymerase V complex &... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan predictions
BP GO:0006351 transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007645 RNA_pol_Rpb2_3 452 516
IPR007646 RNA_pol_Rpb2_4 554 612
IPR007644 RNA_pol_bsu_protrusion 47 409
IPR007647 RNA_pol_Rpb2_5 635 675
IPR007120 DNA-dir_RNAP_su2_dom 682 1059
IPR007641 RNA_pol_Rpb2_7 1061 1151
IPR007642 RNA_pol_Rpb2_2 196 376
No external refs found!