1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_05181

A4A49_05181


Description : photosystem ii reaction center w protein, chloroplastic


Gene families : OG_42_0003970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003970_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_05181
Cluster HCCA clusters: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
At2g30570 No alias PSBW [Source:UniProtKB/TrEMBL;Acc:A0A178VQ32] 0.04 Orthogroups_2024-Update
Bradi2g20380 No alias photosystem II reaction center W 0.05 Orthogroups_2024-Update
Brara.D01828.1 No alias component *(PsbW) of PS-II complex 0.11 Orthogroups_2024-Update
Brara.E01277.1 No alias component *(PsbW) of PS-II complex 0.07 Orthogroups_2024-Update
Glyma.02G141700 No alias photosystem II reaction center W 0.16 Orthogroups_2024-Update
Glyma.03G159100 No alias photosystem II reaction center W 0.1 Orthogroups_2024-Update
Glyma.10G032200 No alias photosystem II reaction center W 0.1 Orthogroups_2024-Update
Glyma.19G161400 No alias photosystem II reaction center W 0.06 Orthogroups_2024-Update
HORVU1Hr1G078140.4 No alias component *(PsbW) of PS-II complex 0.04 Orthogroups_2024-Update
HORVU3Hr1G075870.1 No alias component *(PsbW) of PS-II complex 0.05 Orthogroups_2024-Update
Kfl00638_0030 kfl00638_0030_v1.1 no hits & (original description: no original description) 0.12 Orthogroups_2024-Update
LOC_Os01g56680 No alias photosystem II reaction center W protein, chloroplast... 0.04 Orthogroups_2024-Update
Mp5g14190.1 No alias component PsbW of PS-II complex 0.1 Orthogroups_2024-Update
PSME_00010732-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Pp1s185_110V6 No alias photosystem ii reaction center w chloroplast 0.17 Orthogroups_2024-Update
Pp1s185_111V6 No alias photosystem ii reaction center w chloroplast 0.13 Orthogroups_2024-Update
Seita.3G184900.1 No alias component *(PsbW) of PS-II complex 0.14 Orthogroups_2024-Update
Seita.5G336700.1 No alias component *(PsbW) of PS-II complex 0.14 Orthogroups_2024-Update
Sobic.003G313000.1 No alias component *(PsbW) of PS-II complex 0.13 Orthogroups_2024-Update
Sobic.009G191300.1 No alias component *(PsbW) of PS-II complex 0.03 Orthogroups_2024-Update
Solyc09g065910 No alias photosystem II reaction center W (AHRD V3.3 *** AT2G30570.1) 0.07 Orthogroups_2024-Update
Sopen06g035440 No alias Photosystem II reaction centre W protein (PsbW) 0.07 Orthogroups_2024-Update
Sopen09g027700 No alias Photosystem II reaction centre W protein (PsbW) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA InterProScan predictions
CC GO:0009523 photosystem II IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009806 PSII_PsbW_class2 1 134
No external refs found!