Sopen10g027230

Description : EF hand

Gene families : OG_42_0002982 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002982_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g027230
Cluster	HCCA clusters: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method
HORVU4Hr1G050990.2	No alias	calcium sensor *(CML)	0.03	Orthogroups_2024-Update
MA_13199g0010	No alias	(at4g20780 : 115.0) Calcium sensor involved in trichome...	0.02	Orthogroups_2024-Update
MA_8749g0010	No alias	(at5g44460 : 149.0) calmodulin like 43 (CML43);...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	129	193
IPR002048	EF_hand_dom	40	69

External Links

No external refs found!