1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_05486

A4A49_05486


Description : laccase-17


Gene families : OG_42_0000051 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000051_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_05486
Cluster HCCA clusters: Cluster_155

Target Alias Description ECC score Gene Family Method Actions
80214 No alias laccase 12 0.02 Orthogroups_2024-Update
At2g30210 No alias Laccase-3 [Source:UniProtKB/Swiss-Prot;Acc:Q56YT0] 0.03 Orthogroups_2024-Update
Bradi2g23350 No alias laccase 17 0.01 Orthogroups_2024-Update
Bradi2g54680 No alias laccase 17 0.02 Orthogroups_2024-Update
Bradi2g54740 No alias laccase 2 0.03 Orthogroups_2024-Update
Brara.B00087.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Brara.B01051.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.04 Orthogroups_2024-Update
Brara.E00552.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
GRMZM2G072808 No alias laccase 17 0.03 Orthogroups_2024-Update
Glyma.11G069500 No alias laccase 11 0.03 Orthogroups_2024-Update
Glyma.18G057200 No alias laccase 3 0.03 Orthogroups_2024-Update
Glyma.18G183500 No alias laccase 17 0.03 Orthogroups_2024-Update
HORVU1Hr1G072470.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
HORVU3Hr1G086160.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
LOC_Os01g44330 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g61160 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g62480 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g47390 No alias laccase precursor protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g15680 No alias laccase precursor protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10428927g0020 No alias (at5g05390 : 676.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
MA_10434864g0010 No alias (at5g05390 : 651.0) putative laccase, a member of... 0.04 Orthogroups_2024-Update
MA_28768g0010 No alias (at2g38080 : 580.0) Encodes a protein with similarity to... 0.03 Orthogroups_2024-Update
MA_33288g0010 No alias (at5g05390 : 575.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_67291g0010 No alias (at5g05390 : 697.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_75861g0010 No alias (at1g18140 : 648.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_811078g0010 No alias (at5g05390 : 660.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
MA_812936g0010 No alias (at5g05390 : 539.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
Mp3g20310.1 No alias Laccase-2 OS=Oryza sativa subsp. japonica... 0.02 Orthogroups_2024-Update
PSME_00015369-RA No alias (at5g05390 : 671.0) putative laccase, a member of... 0.02 Orthogroups_2024-Update
PSME_00024478-RA No alias (at5g05390 : 702.0) putative laccase, a member of... 0.05 Orthogroups_2024-Update
PSME_00031560-RA No alias (at5g05390 : 678.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00039722-RA No alias (at5g05390 : 721.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00042058-RA No alias (at5g05390 : 793.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00042485-RA No alias (at5g05390 : 782.0) putative laccase, a member of... 0.03 Orthogroups_2024-Update
PSME_00044158-RA No alias (at2g40370 : 673.0) putative laccase, a member of... 0.06 Orthogroups_2024-Update
PSME_00044448-RA No alias (at5g05390 : 808.0) putative laccase, a member of... 0.06 Orthogroups_2024-Update
Potri.001G054600 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.001G248700 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.006G087100 No alias laccase 17 0.03 Orthogroups_2024-Update
Potri.006G087500 No alias laccase 17 0.04 Orthogroups_2024-Update
Potri.008G073700 No alias laccase 5 0.04 Orthogroups_2024-Update
Potri.009G102700 No alias laccase 11 0.03 Orthogroups_2024-Update
Potri.010G193100 No alias Laccase/Diphenol oxidase family protein 0.03 Orthogroups_2024-Update
Potri.011G120300 No alias laccase 17 0.05 Orthogroups_2024-Update
Potri.016G106000 No alias laccase 7 0.05 Orthogroups_2024-Update
Pp1s17_180V6 No alias laccase 90c 0.02 Orthogroups_2024-Update
Seita.3G297100.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 Orthogroups_2024-Update
Seita.8G252500.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Seita.9G453900.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.03 Orthogroups_2024-Update
Sobic.003G352700.1 No alias lignin laccase & EC_1.10 oxidoreductase acting on... 0.02 Orthogroups_2024-Update
Solyc04g072280 No alias Laccase (AHRD V3.3 *** A0A022Q9N6_ERYGU) 0.04 Orthogroups_2024-Update
Solyc09g011970 No alias Laccase (AHRD V3.3 *** B9HBT3_POPTR) 0.03 Orthogroups_2024-Update
Solyc10g085090 No alias Laccase (AHRD V3.3 *** P93366_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 425 546
IPR001117 Cu-oxidase 167 317
IPR011707 Cu-oxidase_3 41 155
No external refs found!