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  5. A4A49_05648

A4A49_05648


Description : putative e3 ubiquitin-protein ligase hip1


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_05648
Cluster HCCA clusters: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
89607 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
At1g17970 No alias At1g17970/F2H15_16 [Source:UniProtKB/TrEMBL;Acc:Q944L9] 0.04 Orthogroups_2024-Update
At5g42940 No alias Probable E3 ubiquitin-protein ligase RHG1A... 0.02 Orthogroups_2024-Update
Bradi5g20760 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Brara.F00132.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
GRMZM2G165044 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os05g47670 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_20229g0010 No alias (at5g24870 : 184.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.006G274700 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Solyc03g118840 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) 0.05 Orthogroups_2024-Update
Solyc05g008840 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) 0.03 Orthogroups_2024-Update
Sopen03g037790 No alias Ring finger domain 0.03 Orthogroups_2024-Update
Sopen05g004600 No alias Ring finger domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 249 291
No external refs found!