Sopen10g027740

Description : Transcriptional repressor, ovate

Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g027740
Cluster	HCCA clusters: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12744	No alias	transcription repressor ofp4	0.03	Orthogroups_2024-Update
GRMZM2G040673	No alias	ovate family protein 6	0.03	Orthogroups_2024-Update
LOC_Os05g36970	No alias	DUF623 domain containing protein, expressed	0.03	Orthogroups_2024-Update
Pp1s7_273V6	No alias	hypothetical protein [Oryza sativa (japonica cultivar-group)]	0.02	Orthogroups_2024-Update
Seita.9G504200.1	No alias	transcriptional co-regulator *(OFP)	0.06	Orthogroups_2024-Update
Sobic.003G227000.1	No alias	transcriptional co-regulator *(OFP)	0.02	Orthogroups_2024-Update
Sobic.005G042800.1	No alias	transcriptional co-regulator *(OFP)	0.02	Orthogroups_2024-Update
Sobic.006G187600.1	No alias	transcriptional co-regulator *(OFP)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR025830	DNA_bnd_dom_ovate	1	37
IPR006458	Ovate_C	246	302

External Links

No external refs found!