Sopen10g027740


Description : Transcriptional repressor, ovate


Gene families : OG_42_0000150 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000150_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g027740
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
A4A49_12744 No alias transcription repressor ofp4 0.03 Orthogroups_2024-Update
GRMZM2G040673 No alias ovate family protein 6 0.03 Orthogroups_2024-Update
LOC_Os05g36970 No alias DUF623 domain containing protein, expressed 0.03 Orthogroups_2024-Update
Pp1s7_273V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.02 Orthogroups_2024-Update
Seita.9G504200.1 No alias transcriptional co-regulator *(OFP) 0.06 Orthogroups_2024-Update
Sobic.003G227000.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
Sobic.005G042800.1 No alias transcriptional co-regulator *(OFP) 0.02 Orthogroups_2024-Update
Sobic.006G187600.1 No alias transcriptional co-regulator *(OFP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025830 DNA_bnd_dom_ovate 1 37
IPR006458 Ovate_C 246 302
No external refs found!