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  5. A4A49_06164

A4A49_06164


Description : germacrene c synthase


Gene families : OG_42_0000137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_06164
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_20624 No alias viridiflorene synthase 0.04 Orthogroups_2024-Update
A4A49_23060 No alias germacrene c synthase 0.04 Orthogroups_2024-Update
At1g66020 No alias Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3] 0.02 Orthogroups_2024-Update
Bradi3g14710 No alias terpene synthase 02 0.03 Orthogroups_2024-Update
Bradi3g15956 No alias terpene synthase 21 0.04 Orthogroups_2024-Update
Bradi4g04965 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g04987 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G117319 No alias Terpenoid cyclases/Protein prenyltransferases superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G140600 No alias terpene synthase 21 0.02 Orthogroups_2024-Update
HORVU5Hr1G004700.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.6G048400.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Seita.6G048900.1 No alias EC_4.2 carbon-oxygen lyase &... 0.01 Orthogroups_2024-Update
Seita.7G146000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.04 Orthogroups_2024-Update
Seita.8G192000.1 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Sobic.007G034700.3 No alias EC_4.2 carbon-oxygen lyase &... 0.03 Orthogroups_2024-Update
Solyc04g054380 No alias Terpene synthase (AHRD V3.3 *** G5CV47_SOLLC) 0.04 Orthogroups_2024-Update
Sopen01g044670 No alias Terpene synthase family, metal binding domain 0.02 Orthogroups_2024-Update
Sopen06g020030 No alias Terpene synthase family, metal binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0010333 terpene synthase activity IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005630 Terpene_synthase_metal-bd 304 569
IPR001906 Terpene_synth_N 97 273
No external refs found!