A4A49_06467

Description : ethylene-responsive transcription factor crf4

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Nicotiana release: A4A49_06467
Cluster	HCCA clusters: Cluster_10

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.06	Orthogroups_2024-Update
A4A49_03112	No alias	ethylene-responsive transcription factor crf4	0.05	Orthogroups_2024-Update
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.04	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.06	Orthogroups_2024-Update
A4A49_16579	No alias	ethylene-responsive transcription factor abr1	0.04	Orthogroups_2024-Update
A4A49_16905	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_20188	No alias	ethylene-responsive transcription factor erf062	0.06	Orthogroups_2024-Update
A4A49_20472	No alias	ethylene-responsive transcription factor 13	0.04	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.03	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.06	Orthogroups_2024-Update
A4A49_36962	No alias	ethylene-responsive transcription factor erf003	0.04	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
AC187157.4_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
AC198403.3_FG001	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At1g43160	No alias	Ethylene-responsive transcription factor RAP2-6...	0.03	Orthogroups_2024-Update
At1g50640	No alias	Uncharacterized protein At1g50640 (Fragment)...	0.04	Orthogroups_2024-Update
At2g47520	No alias	Ethylene-responsive transcription factor ERF071...	0.02	Orthogroups_2024-Update
At3g23230	No alias	Ethylene-responsive transcription factor ERF098...	0.02	Orthogroups_2024-Update
At5g13910	No alias	LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]	0.03	Orthogroups_2024-Update
At5g19790	No alias	Ethylene-responsive transcription factor RAP2-11...	0.04	Orthogroups_2024-Update
At5g25390	No alias	SHN3 [Source:UniProtKB/TrEMBL;Acc:A0A178USD7]	0.03	Orthogroups_2024-Update
At5g47230	No alias	ERF5 [Source:UniProtKB/TrEMBL;Acc:A0A178UKK9]	0.03	Orthogroups_2024-Update
At5g51990	No alias	C-repeat binding factor 4 [Source:UniProtKB/TrEMBL;Acc:B2BJ26]	0.03	Orthogroups_2024-Update
At5g61890	No alias	Ethylene-responsive transcription factor ERF114...	0.04	Orthogroups_2024-Update
Bradi1g54450	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Brara.A01860.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.A02664.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.A03039.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.B00174.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.B00844.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Brara.B01950.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.04	Orthogroups_2024-Update
Brara.C00977.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.C01398.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.F01354.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.03	Orthogroups_2024-Update
Brara.G03053.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.03	Orthogroups_2024-Update
Brara.H01292.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.H01995.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.I01413.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.J02251.1	No alias	cutin and suberin biosynthesis transcription factor...	0.03	Orthogroups_2024-Update
Brara.K00042.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G069082	No alias	C-repeat-binding factor 4	0.04	Orthogroups_2024-Update
GRMZM2G175543	No alias	ethylene responsive element binding factor 4	0.04	Orthogroups_2024-Update
GRMZM2G466044	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
GRMZM5G837876	No alias	ethylene-responsive element binding factor 15	0.03	Orthogroups_2024-Update
Glyma.01G231000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.02G236800	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.03G017300	No alias	related to AP2 11	0.05	Orthogroups_2024-Update
Glyma.03G112000	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
Glyma.03G112100	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
Glyma.03G138900	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.03G162700	No alias	ethylene-responsive element binding factor 15	0.04	Orthogroups_2024-Update
Glyma.04G201700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G015900	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Glyma.05G228100	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.06G221800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G027000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G156200	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G250100	No alias	Integrase-type DNA-binding superfamily protein	0.06	Orthogroups_2024-Update
Glyma.08G281900	No alias	DORNROSCHEN-like	0.03	Orthogroups_2024-Update
Glyma.08G320700	No alias	ethylene responsive element binding factor 3	0.02	Orthogroups_2024-Update
Glyma.09G194800	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Glyma.10G016500	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.10G036700	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Glyma.10G099800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G187000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G040400	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.13G122600	No alias	ethylene response factor 1	0.06	Orthogroups_2024-Update
Glyma.13G152000	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Glyma.17G194100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G252400	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.19G163700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.19G164100	No alias	ethylene response factor 1	0.01	Orthogroups_2024-Update
Glyma.20G168500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G082310.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
HORVU2Hr1G071270.4	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
HORVU6Hr1G050520.2	No alias	subgroup ERF-IV/DREB2 transcription factor	0.02	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os05g25260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g40150	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g41130	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g39330	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10031781g0010	No alias	(at5g51190 : 100.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
MA_10433094g0010	No alias	(at1g74930 : 123.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_13408g0010	No alias	(at1g21910 : 95.9) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_201698g0010	No alias	(at5g11590 : 124.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_26547g0010	No alias	(at4g23750 : 91.7) encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_891091g0010	No alias	(at4g17500 : 92.0) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
MA_94228g0010	No alias	(at5g25190 : 160.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
MA_97319g0010	No alias	(at3g16280 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00004941-RA	No alias	(at4g17500 : 94.7) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00005184-RA	No alias	(q40479\|erf2_tobac : 141.0) Ethylene-responsive...	0.05	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00005186-RA	No alias	(at4g17500 : 141.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00008897-RA	No alias	(at4g17500 : 88.2) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00034722-RA	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037533-RA	No alias	(at5g61890 : 108.0) encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00041310-RA	No alias	(at1g75490 : 82.8) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
PSME_00048384-RA	No alias	(at5g11190 : 113.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00051454-RA	No alias	(at1g19210 : 98.6) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00051455-RA	No alias	(at5g21960 : 102.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00052455-RA	No alias	(at1g19210 : 114.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
Potri.001G067600	No alias	related to AP2 6l	0.05	Orthogroups_2024-Update
Potri.001G110700	No alias	C-repeat-binding factor 4	0.04	Orthogroups_2024-Update
Potri.001G181500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.001G313500	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.001G315300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.002G065600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.003G050700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.003G220200	No alias	related to AP2 11	0.04	Orthogroups_2024-Update
Potri.004G187001	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
Potri.005G233300	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.008G210900	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Potri.009G147700	No alias	dehydration response element B1A	0.03	Orthogroups_2024-Update
Potri.010G072300	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.010G163900	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Potri.010G186400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.011G115600	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Potri.012G134000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G046900	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Potri.014G094500	No alias	cytokinin response factor 5	0.03	Orthogroups_2024-Update
Potri.015G136400	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G088000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Pp1s2_410V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Seita.1G187800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.1G270800.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Seita.2G215500.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.02	Orthogroups_2024-Update
Seita.4G051200.1	No alias	subgroup ERF-V transcription factor	0.03	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Seita.6G181700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.7G205100.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G002500.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G481600.2	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.004G158901.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.004G297100.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G103100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G167900.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.006G210300.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.007G077001.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G077300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.009G184400.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Solyc01g009440	No alias	C-repeat binding factor 1 (AHRD V3.3 *** A0A077B5X4_9ROSI)	0.04	Orthogroups_2024-Update
Solyc01g090560	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc02g090770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc03g006320	No alias	Ethylene-responsive transcription factor, putative (AHRD...	0.02	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.04	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.03	Orthogroups_2024-Update
Solyc04g051360	No alias	Ethylene Response Factor D.1	0.06	Orthogroups_2024-Update
Solyc05g051200	No alias	ethylene-responsive factor 1	0.02	Orthogroups_2024-Update
Solyc05g052050	No alias	DNA-binding protein Pti4	0.02	Orthogroups_2024-Update
Solyc06g035700	No alias	Dehydration responsive element binding transcription...	0.03	Orthogroups_2024-Update
Solyc06g065820	No alias	Ethylene Response Factor H.1	0.03	Orthogroups_2024-Update
Solyc08g078190	No alias	ethylene-responsive transcription factor	0.03	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Solyc12g008350	No alias	dehydration responsive element binding protein 2	0.03	Orthogroups_2024-Update
Sopen02g022270	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen02g035420	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g002330	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g005150	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen03g041270	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen04g006170	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g030600	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g019690	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g025620	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen10g008890	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	134	183

External Links

No external refs found!

A4A49_06467

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation