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  5. A4A49_06501

A4A49_06501


Description : retrovirus-related pol polyprotein from transposon tnt 1-94


Gene families : OG_42_0000008 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_06501
Cluster HCCA clusters: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g52000 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc05g053320 No alias LOW QUALITY:Retrovirus-related Pol polyprotein from... 0.02 Orthogroups_2024-Update
Solyc06g051490 No alias No description available 0.03 Orthogroups_2024-Update
Solyc09g030500 No alias No description available 0.03 Orthogroups_2024-Update
Solyc09g059360 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g008430 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen06g011320 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.02 Orthogroups_2024-Update
Sopen08g011210 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g015220 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen10g019840 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 1 163
No external refs found!