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  5. Sopen10g028020

Sopen10g028020


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g028020
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
A4A49_02884 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
A4A49_18156 No alias ethylene-responsive transcription factor shine 3 0.03 Orthogroups_2024-Update
A4A49_36835 No alias ethylene-responsive transcription factor 5 0.04 Orthogroups_2024-Update
Bradi2g60331 No alias C-repeat/DRE binding factor 1 0.03 Orthogroups_2024-Update
Brara.B01460.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.04 Orthogroups_2024-Update
Brara.B02236.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G02224.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.03 Orthogroups_2024-Update
Brara.G03500.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Brara.J00642.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Brara.J02098.1 No alias subgroup ERF-X transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G003466 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G020016 No alias ERF domain protein 12 0.03 Orthogroups_2024-Update
GRMZM2G068967 No alias ethylene response factor 7 0.04 Orthogroups_2024-Update
GRMZM2G149756 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G481668 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.06G295300 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G103100 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Glyma.19G035500 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G164100 No alias ethylene response factor 1 0.07 Orthogroups_2024-Update
HORVU0Hr1G036300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10435354g0010 No alias (at1g19210 : 88.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00008891-RA No alias (at4g17500 : 93.6) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
PSME_00014384-RA No alias (at5g21960 : 93.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00057235-RA No alias (at5g11590 : 122.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.001G154200 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Potri.003G121200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.006G104200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.009G101900 No alias redox responsive transcription factor 1 0.04 Orthogroups_2024-Update
Potri.014G094500 No alias cytokinin response factor 5 0.03 Orthogroups_2024-Update
Pp1s127_75V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Pp1s13_457V6 No alias ap2 erf domain-containing transcription factor 0.03 Orthogroups_2024-Update
Pp1s276_50V6 No alias ap2 erf domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.3G272600.1 No alias transcription factor component *(HRE/RAP2.12) of... 0.03 Orthogroups_2024-Update
Seita.6G235100.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.7G290600.1 No alias subgroup ERF-X transcription factor 0.05 Orthogroups_2024-Update
Sobic.006G058732.1 No alias subgroup ERF-X transcription factor 0.06 Orthogroups_2024-Update
Sobic.007G077001.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G077300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.009G170800.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.04 Orthogroups_2024-Update
Sobic.009G184400.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Sobic.010G071700.1 No alias subgroup ERF-VII transcription factor & transcription... 0.04 Orthogroups_2024-Update
Solyc02g090770 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc04g014530 No alias Ethylene Response Factor C.2 0.04 Orthogroups_2024-Update
Solyc11g011750 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g039250 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen09g030200 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 67 125
No external refs found!