1. Home
  2. Species
  3. Nicotiana attenuata
  4. Sequence
  5. A4A49_06568

A4A49_06568


Description : syntaxin-related protein knolle


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Nicotiana release: A4A49_06568
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
130326 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
At1g08560 No alias SYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8] 0.04 Orthogroups_2024-Update
Brara.C03386.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Brara.F00536.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.09 Orthogroups_2024-Update
Brara.H02867.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.07 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.02 Orthogroups_2024-Update
Glyma.02G069700 No alias syntaxin of plants 111 0.05 Orthogroups_2024-Update
Glyma.16G151200 No alias syntaxin of plants 111 0.08 Orthogroups_2024-Update
HORVU6Hr1G038490.2 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Potri.019G030800 No alias syntaxin of plants 111 0.08 Orthogroups_2024-Update
Seita.1G039700.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Seita.2G337400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Solyc01g109750 No alias Syntaxin, putative (AHRD V3.3 *** B9RH57_RICCO) 0.05 Orthogroups_2024-Update
Solyc06g053760 No alias Syntaxin, putative (AHRD V3.3 *** B9SHK3_RICCO) 0.1 Orthogroups_2024-Update
Sopen06g018880 No alias SNARE domain 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 251 301
IPR006011 Syntaxin_N 40 248
No external refs found!