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  5. A4A49_06602

A4A49_06602


Description : putative polygalacturonase


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Nicotiana release: A4A49_06602
Cluster HCCA clusters: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Brara.C03174.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Brara.I04239.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.07G244200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G256100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.15G179500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G063400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Sobic.007G006700.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Solyc06g060170 No alias Pectin lyase-like superfamily protein (AHRD V3.3 *** AT4G33440.1) 0.05 Orthogroups_2024-Update
Sopen05g028340 No alias Glycosyl hydrolases family 28 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 159 429
No external refs found!