Sopen10g028090

Description : NB-ARC domain

Gene families : OG_42_0000113 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen10g028090
Cluster	HCCA clusters: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
At1g52660	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.02	Orthogroups_2024-Update
Brara.F00299.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Glyma.12G236500	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
MA_199361g0010	No alias	(at4g26090 : 80.5) Encodes a plasma membrane protein...	0.03	Orthogroups_2024-Update
MA_5216516g0010	No alias	(at5g63020 : 94.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
PSME_00004005-RA	No alias	(at1g15890 : 219.0) Disease resistance protein...	0.02	Orthogroups_2024-Update
PSME_00004350-RA	No alias	(at1g12220 : 109.0) Resistance gene, mediates resistance...	0.02	Orthogroups_2024-Update
PSME_00004922-RA	No alias	(at1g12280 : 266.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
PSME_00028592-RA	No alias	(at1g12220 : 233.0) Resistance gene, mediates resistance...	0.02	Orthogroups_2024-Update
PSME_00033120-RA	No alias	(at1g63350 : 267.0) Disease resistance protein...	0.03	Orthogroups_2024-Update
PSME_00046780-RA	No alias	(at4g10780 : 218.0) LRR and NB-ARC domains-containing...	0.03	Orthogroups_2024-Update
Potri.T003600	No alias	NB-ARC domain-containing disease resistance protein	0.03	Orthogroups_2024-Update
Seita.7G165000.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc11g007790	No alias	LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	108	344

External Links

No external refs found!