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  5. Sopen10g028150

Sopen10g028150


Description : Thiamine pyrophosphate enzyme, N-terminal TPP binding domain


Gene families : OG_42_0000963 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000963_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen10g028150
Cluster HCCA clusters: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g06660 No alias thiamine pyrophosphate enzyme, C-terminal TPP binding... 0.04 Orthogroups_2024-Update
LOC_Os03g18220 No alias pyruvate decarboxylase isozyme 2, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00022292-RA No alias (at4g33070 : 389.0) Thiamine pyrophosphate dependent... 0.03 Orthogroups_2024-Update
PSME_00029235-RA No alias (at4g33070 : 372.0) Thiamine pyrophosphate dependent... 0.02 Orthogroups_2024-Update
Potri.016G120100 No alias Thiamine pyrophosphate dependent pyruvate decarboxylase... 0.02 Orthogroups_2024-Update
Seita.9G439800.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update
Sobic.009G169000.1 No alias pyruvate decarboxylase *(PDC) & EC_4.1 carbon-carbon lyase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan predictions
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0030976 thiamine pyrophosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012000 Thiamin_PyroP_enz_cen_dom 239 356
IPR012001 Thiamin_PyroP_enz_TPP-bd_dom 42 209
IPR011766 TPP_enzyme-bd_C 449 574
No external refs found!